STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mtnN5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. (194 aa)    
Predicted Functional Partners:
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.914
pgeF
Laccase domain protein; Belongs to the multicopper oxidase YfiH/RL5 family.
    
 0.906
ylaC_1
RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily.
       0.627
ALJ61749.1
Hypothetical protein.
       0.627
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
  
  
 0.566
ALJ61745.1
Hypothetical protein.
       0.549
gltB_2
Ferredoxin-dependent glutamate synthase 1.
     
 0.523
ALJ61744.1
Hypothetical protein.
       0.489
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.429
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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