STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ61883.1Hypothetical protein. (518 aa)    
Predicted Functional Partners:
ALJ61882.1
Fec operon regulator FecR.
 
    0.936
rpoE_7
ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.877
ALJ61880.1
Hypothetical protein.
 
    
0.801
ALJ61884.1
Hypothetical protein.
       0.648
eam
Glutamate 2,3-aminomutase.
  
     0.644
ALJ59068.1
Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.603
ALJ60349.1
Tetratricopeptide repeat protein.
  
     0.590
ALJ59541.1
Tetratricopeptide repeat protein.
  
     0.562
ALJ62236.1
Hypothetical protein; VirE N-terminal domain.
  
     0.556
ALJ61558.1
Hypothetical protein; VirE N-terminal domain.
  
     0.554
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.