Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
phoB_3Phosphate regulon transcriptional regulatory protein PhoB. (225 aa)    
Predicted Functional Partners:
qseC
Sensor protein QseC.
 
 
 0.959
rssA_3
Swarming motility regulation sensor protein RssA.
 
 
 0.824
arlS_1
Signal transduction histidine-protein kinase ArlS.
 
 
 0.763
phoR_3
Alkaline phosphatase synthesis sensor protein PhoR.
 
 
 0.738
phoB_4
Phosphate regulon transcriptional regulatory protein PhoB.
  
     0.735
arlS_2
Signal transduction histidine-protein kinase ArlS.
 
   0.724
ALJ61914.1
Hypothetical protein.
 
  
 0.717
phoR_5
Alkaline phosphatase synthesis sensor protein PhoR.
  
   0.695
senX3_1
Signal-transduction histidine kinase senX3.
  
   0.692
srrB_2
Sensor protein SrrB.
  
   0.692
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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