Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ59695.1 | ugl_5 | BcellWH2_02456 | BcellWH2_04821 | MAC/Perforin domain protein. | Unsaturated chondroitin disaccharide hydrolase. | 0.400 |
ALJ60164.1 | gno | BcellWH2_02926 | BcellWH2_02925 | Hypothetical protein. | Gluconate 5-dehydrogenase. | 0.759 |
ALJ60164.1 | kduI | BcellWH2_02926 | BcellWH2_02924 | Hypothetical protein. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.798 |
ALJ60164.1 | ugl_5 | BcellWH2_02926 | BcellWH2_04821 | Hypothetical protein. | Unsaturated chondroitin disaccharide hydrolase. | 0.487 |
ALJ62032.1 | ALJ62034.1 | BcellWH2_04823 | BcellWH2_04825 | Retaining alpha-galactosidase precursor. | Hypothetical protein. | 0.663 |
ALJ62032.1 | ugl_5 | BcellWH2_04823 | BcellWH2_04821 | Retaining alpha-galactosidase precursor. | Unsaturated chondroitin disaccharide hydrolase. | 0.587 |
ALJ62032.1 | xynB_10 | BcellWH2_04823 | BcellWH2_04822 | Retaining alpha-galactosidase precursor. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.503 |
ALJ62034.1 | ALJ62032.1 | BcellWH2_04825 | BcellWH2_04823 | Hypothetical protein. | Retaining alpha-galactosidase precursor. | 0.663 |
ALJ62034.1 | ugl_5 | BcellWH2_04825 | BcellWH2_04821 | Hypothetical protein. | Unsaturated chondroitin disaccharide hydrolase. | 0.408 |
ALJ62034.1 | xynB_10 | BcellWH2_04825 | BcellWH2_04822 | Hypothetical protein. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.429 |
gno | ALJ60164.1 | BcellWH2_02925 | BcellWH2_02926 | Gluconate 5-dehydrogenase. | Hypothetical protein. | 0.759 |
gno | kduI | BcellWH2_02925 | BcellWH2_02924 | Gluconate 5-dehydrogenase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.878 |
gno | ugl_5 | BcellWH2_02925 | BcellWH2_04821 | Gluconate 5-dehydrogenase. | Unsaturated chondroitin disaccharide hydrolase. | 0.504 |
kduI | ALJ60164.1 | BcellWH2_02924 | BcellWH2_02926 | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Hypothetical protein. | 0.798 |
kduI | gno | BcellWH2_02924 | BcellWH2_02925 | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Gluconate 5-dehydrogenase. | 0.878 |
kduI | ugl_5 | BcellWH2_02924 | BcellWH2_04821 | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Unsaturated chondroitin disaccharide hydrolase. | 0.412 |
ugl_5 | ALJ59695.1 | BcellWH2_04821 | BcellWH2_02456 | Unsaturated chondroitin disaccharide hydrolase. | MAC/Perforin domain protein. | 0.400 |
ugl_5 | ALJ60164.1 | BcellWH2_04821 | BcellWH2_02926 | Unsaturated chondroitin disaccharide hydrolase. | Hypothetical protein. | 0.487 |
ugl_5 | ALJ62032.1 | BcellWH2_04821 | BcellWH2_04823 | Unsaturated chondroitin disaccharide hydrolase. | Retaining alpha-galactosidase precursor. | 0.587 |
ugl_5 | ALJ62034.1 | BcellWH2_04821 | BcellWH2_04825 | Unsaturated chondroitin disaccharide hydrolase. | Hypothetical protein. | 0.408 |
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