STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ62058.1Hypothetical protein. (532 aa)    
Predicted Functional Partners:
ALJ58560.1
PD-(D/E)XK nuclease family transposase.
 
     0.552
ALJ59823.1
Archaeal ATPase.
  
     0.546
ALJ62229.1
Hypothetical protein.
  
     0.537
ALJ57900.1
Hypothetical protein.
  
     0.513
ALJ62059.1
Hypothetical protein.
       0.488
ALJ61389.1
Nucleotidyltransferase domain protein.
  
     0.471
ALJ58260.1
Phosphopantetheine attachment site.
 
   
 0.441
ALJ59786.1
Hypothetical protein.
  
   
 0.440
ALJ59792.1
Hypothetical protein; DUF based on B. Theta Gene description.
 
  
 0.437
ALJ61390.1
HEPN domain protein.
  
     0.411
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.