STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbpI_2UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase. (380 aa)    
Predicted Functional Partners:
ALJ62187.1
NAD dependent epimerase/dehydratase family protein.
 
 
 0.996
capD
UDP-glucose 4-epimerase.
 
  
 0.954
ALJ62189.1
Putative glycosyl transferase.
 
  
 0.940
rmd_3
GDP-6-deoxy-D-mannose reductase.
  
  
 0.726
rfbC_4
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.696
ALJ62183.1
Glycosyl transferase family 2.
       0.669
ALJ62185.1
Glycosyl transferase family 2.
       0.669
ALJ62184.1
Hypothetical protein.
       0.658
wbpA_3
UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.601
epsE_3
Putative glycosyltransferase EpsE.
  
  
 0.594
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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