STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_12Conserved hypothetical protein. (380 aa)    
Predicted Functional Partners:
TAM4_846
Putative PIN domain protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.
 
     0.793
TAM4_47
Archaeal ATPase, fused to C-terminal DUF234 domain protein.
       0.747
TAM4_213
Tetratricopeptide repeat domain protein.
 
     0.726
rtcB
Protein RtcB; Belongs to the RtcB family.
     
 0.544
TAM4_86
Conserved hypothetical protein.
       0.536
TAM4_248
Hypothetical protein.
       0.533
TAM4_343
Conserved hypothetical protein.
       0.533
rpl10e
LSU ribosomal protein L10e (L16p); Belongs to the universal ribosomal protein uL16 family.
       0.466
TAM4_1747
DNA polymerase family B.
 
    0.461
TAM4_1418
Conserved hypothetical protein; Belongs to the UPF0216 family.
  
     0.437
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.