STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_1237Glutamine ABC transporter, glutamine-binding periplasmic protein. (229 aa)    
Predicted Functional Partners:
TAM4_1155
Glutamine ABC transporter, ATP-binding protein.
 0.999
TAM4_1123
Glutamine ABC transporter, periplasmic glutamine-binding protein.
 0.997
TAM4_1455
Polar amino acid ABC transporter, permease component.
 
  
 
0.978
TAM4_647
Maltose/maltodextrin ABC transporter permease protein MalG.
    
 0.875
TAM4_1544
ABC-type molybdate transport system, ATPase component.
  
 
  0.863
TAM4_614
ATPase component NikO of energizing module of nickel ECF transporter.
 
  0.835
TAM4_2102
ABC-type manganese/zinc transport system, permease component.
  
 
 0.824
TAM4_850
Transmembrane component NikQ of energizing module of nickel ECF transporter.
  
 
 0.805
TAM4_967
Maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE.
    
 0.800
TAM4_1635
Thiamin ABC transporter, ATPase component.
     
  0.799
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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