STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_197ATPase. (362 aa)    
Predicted Functional Partners:
TAM4_891
Hypothetical protein.
  
     0.683
TAM4_187
Conserved hypothetical protein.
       0.649
TAM4_198
Phosphatidate cytidylyltransferase.
  
     0.589
TAM4_617
Putative PIN domain protein.
 
     0.539
TAM4_1946
Putative membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.515
TAM4_519
Hypothetical protein.
  
     0.475
TAM4_999
ATPase, AAA superfamily.
  
     0.469
TAM4_25
Putative chromosome partitioning protein ParB-like protein.
       0.451
TAM4_1198
ATPase, AAA superfamily.
  
     0.431
TAM4_58
Hypothetical protein.
  
     0.416
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.