STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_1981Hypothetical protein. (80 aa)    
Predicted Functional Partners:
TAM4_2120
Hypothetical protein.
       0.871
TAM4_2071
Multidrug resistance protein.
       0.684
TAM4_1901
Conserved hypothetical protein.
       0.561
TAM4_2140
Hypothetical protein.
       0.477
TAM4_1964
Roadblock/LC7 family protein.
       0.476
TAM4_1944
Transcription regulator, ArsR family.
  
    0.416
TAM4_2004
Hypothetical protein.
       0.408
TAM4_2170
Hypothetical protein.
       0.408
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.