Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TAM4_2001ABC-type iron(III) transport system, periplasmic component. (531 aa)    
Predicted Functional Partners:
TAM4_2118
ABC-type iron(III) transport system, permease component.
 
 
 0.996
TAM4_1958
ABC transporter ATP-binding protein.
 
  
  0.968
TAM4_778
Ferric iron ABC transporter permease protein.
 
 
 0.958
TAM4_627
ABC transporter iron-binding periplasmic protein.
  
  
 
0.919
TAM4_2349
Hypothetical protein.
       0.896
TAM4_1502
Metallophosphoesterase, calcineurin superfamily.
 
     0.871
TAM4_600
Putrescine transport ATP-binding protein.
 
  
  0.867
TAM4_1694
Thiamin ABC transporter, transmembrane component.
 
  
 0.737
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 4 subfamily.
 
   
 0.637
TAM4_2102
ABC-type manganese/zinc transport system, permease component.
 
   
 0.616
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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