STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_2199Molybdopterin oxidoreductase. (639 aa)    
Predicted Functional Partners:
TAM4_363
Putative NADPH-dependent sulfur oxidoreductase NsoABCD subunit B.
  
  
 0.679
TAM4_1054
4Fe-4S cluster-binding protein CooF.
 
 
 0.669
TAM4_1130
Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.669
TAM4_719
4Fe-4S cluster-binding protein.
 
 
 0.669
TAM4_766
4Fe-4S cluster-binding protein CooF.
  
 
 0.669
TAM4_1942
Riboflavin synthase, alpha chain.
       0.540
ribA
Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.540
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
     
 0.537
TAM4_1909
Riboflavin biosynthesis protein RibD.
       0.536
TAM4_2096
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.530
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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