STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_240Methylmalonyl-CoA mutase. (142 aa)    
Predicted Functional Partners:
TAM4_1527
Methylmalonyl-CoA mutase.
 0.999
TAM4_345
Methylmalonyl-CoA epimerase.
  
 0.998
TAM4_228
Periplasmic protein kinase ArgK.
  
 0.979
TAM4_1869
2-oxoglutarate oxidoreductase gamma subunit.
    
 0.909
TAM4_1882
2-oxoglutarate oxidoreductase alpha subunit.
    
 0.909
TAM4_1911
2-oxoglutarate oxidoreductase gamma subunit.
    
 0.909
TAM4_1941
2-oxoglutarate oxidoreductase beta subunit.
    
 0.909
TAM4_2160
2-oxoglutarate oxidoreductase alpha subunit.
    
 0.909
TAM4_2188
2-oxoglutarate oxidoreductase beta subunit.
    
 0.909
TAM4_2091
2-oxoglutarate oxidoreductase delta subunit.
    
 0.901
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.