STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_511Hypothetical protein. (164 aa)    
Predicted Functional Partners:
TAM4_650
Hypothetical protein.
 
     0.966
TAM4_512
Hypothetical protein.
 
     0.960
TAM4_746
Hypothetical protein.
 
     0.952
TAM4_2305
Hypothetical protein.
       0.420
TAM4_845
Hypothetical protein.
       0.420
TAM4_592
Hydroxymethylglutaryl-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family.
  
     0.403
TAM4_799
Hypothetical protein.
       0.402
TAM4_942
DNA repair helicase Rad3.
  
     0.400
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.