STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_613Hypothetical protein. (208 aa)    
Predicted Functional Partners:
cetZ
Cell division protein FtsZ; Involved in cell shape control; Belongs to the CetZ family.
       0.897
TAM4_814
Hypothetical protein.
       0.897
TAM4_698
Hypothetical protein.
     
 0.852
TAM4_2307
Hypothetical protein.
       0.847
TAM4_2308
Hypothetical protein.
       0.847
TAM4_482
Hypothetical protein.
       0.847
TAM4_555
Hypothetical protein.
       0.847
TAM4_794
Hypothetical protein.
       0.847
TAM4_900
Hypothetical protein.
       0.847
taw1
Radical SAM family protein; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe).
       0.842
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.