STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAM4_754Carbon monoxide dehydrogenase accessory nickel-insertion protein CooC. (301 aa)    
Predicted Functional Partners:
TAM4_582
Carbon monoxide dehydrogenase CooS.
 
   
 0.765
TAM4_1067
Carbon monoxide dehydrogenase CooS.
 
   
 0.763
TAM4_687
ABC-type iron(III)-siderophore transport system, periplasmic component.
 
     0.637
TAM4_786
ABC-type iron(III)-siderophore transport system ATPase component.
 
     0.615
TAM4_841
Iron (III) ABC transporter permease protein.
       0.563
glkA
ADP-dependent glucokinase; Catalyzes the phosphorylation of D-glucose to D-glucose 6- phosphate using ADP as the phosphate donor.
       0.452
Your Current Organism:
Thermococcus sp. AM4
NCBI taxonomy Id: 246969
Other names: T. sp. AM4
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