Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
TAM4_1544 | TAM4_647 | ABC-type molybdate transport system, ATPase component. | Maltose/maltodextrin ABC transporter permease protein MalG. | 0.729 |
TAM4_1544 | TAM4_816 | ABC-type molybdate transport system, ATPase component. | ABC-type maltodextrin transport system permease component. | 0.717 |
TAM4_1544 | TAM4_967 | ABC-type molybdate transport system, ATPase component. | Maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE. | 0.404 |
TAM4_1607 | TAM4_432 | Maltodextrin glucosidase. | Amylopullulanase. | 0.628 |
TAM4_1607 | TAM4_475 | Maltodextrin glucosidase. | Neopullulanase/cyclomaltodextrinase. | 0.925 |
TAM4_1607 | TAM4_616 | Maltodextrin glucosidase. | Glycogen synthase ADP-glucose transglucosylase. | 0.731 |
TAM4_1607 | TAM4_647 | Maltodextrin glucosidase. | Maltose/maltodextrin ABC transporter permease protein MalG. | 0.921 |
TAM4_1607 | TAM4_816 | Maltodextrin glucosidase. | ABC-type maltodextrin transport system permease component. | 0.708 |
TAM4_1607 | TAM4_967 | Maltodextrin glucosidase. | Maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE. | 0.764 |
TAM4_432 | TAM4_1607 | Amylopullulanase. | Maltodextrin glucosidase. | 0.628 |
TAM4_432 | TAM4_475 | Amylopullulanase. | Neopullulanase/cyclomaltodextrinase. | 0.747 |
TAM4_432 | TAM4_523 | Amylopullulanase. | Conserved hypothetical protein; Belongs to the UPF0146 family. | 0.753 |
TAM4_432 | TAM4_616 | Amylopullulanase. | Glycogen synthase ADP-glucose transglucosylase. | 0.706 |
TAM4_432 | TAM4_647 | Amylopullulanase. | Maltose/maltodextrin ABC transporter permease protein MalG. | 0.783 |
TAM4_432 | TAM4_696 | Amylopullulanase. | Maltose/maltodextrin transport ATP-binding protein MalK. | 0.703 |
TAM4_432 | TAM4_816 | Amylopullulanase. | ABC-type maltodextrin transport system permease component. | 0.789 |
TAM4_432 | TAM4_967 | Amylopullulanase. | Maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE. | 0.886 |
TAM4_475 | TAM4_1607 | Neopullulanase/cyclomaltodextrinase. | Maltodextrin glucosidase. | 0.925 |
TAM4_475 | TAM4_432 | Neopullulanase/cyclomaltodextrinase. | Amylopullulanase. | 0.747 |
TAM4_475 | TAM4_523 | Neopullulanase/cyclomaltodextrinase. | Conserved hypothetical protein; Belongs to the UPF0146 family. | 0.415 |
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