rps28e protein (Thermococcus sp. AM4) - STRING interaction network

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Score

rps28e

SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (70 aa)

Predicted Functional Partners:

rps7

0.999

rps6e

0.999

rps12

0.999

rpl40e

0.999

rps19e

0.999

rps4

0.999

rps19p

0.999

rps13

0.999

rps3

0.999

rps9

0.999

Your Current Organism:

Thermococcus sp. AM4

NCBI taxonomy Id: 246969
Other names: T. sp. AM4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl40e	rps12	TAM4_184	TAM4_1725	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	0.998
rpl40e	rps13	TAM4_184	TAM4_256	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S18e (S13p); Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.999
rpl40e	rps19e	TAM4_184	TAM4_2069	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rpl40e	rps19p	TAM4_184	TAM4_254	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rpl40e	rps28e	TAM4_184	TAM4_89	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl40e	rps3	TAM4_184	TAM4_263	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S3e (S3p); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.999
rpl40e	rps4	TAM4_184	TAM4_223	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S9e (S4p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rpl40e	rps6e	TAM4_184	TAM4_1687	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rpl40e	rps7	TAM4_184	TAM4_1514	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	SSU ribosomal protein S5e (S7p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.998
rpl40e	rps9	TAM4_184	TAM4_272	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	LSU ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rps12	rpl40e	TAM4_1725	TAM4_184	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.998
rps12	rps13	TAM4_1725	TAM4_256	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S18e (S13p); Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.999
rps12	rps19e	TAM4_1725	TAM4_2069	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rps12	rps19p	TAM4_1725	TAM4_254	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rps12	rps28e	TAM4_1725	TAM4_89	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rps12	rps3	TAM4_1725	TAM4_263	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S3e (S3p); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.999
rps12	rps4	TAM4_1725	TAM4_223	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S9e (S4p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rps12	rps6e	TAM4_1725	TAM4_1687	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rps12	rps7	TAM4_1725	TAM4_1514	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	SSU ribosomal protein S5e (S7p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.999
rps12	rps9	TAM4_1725	TAM4_272	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	LSU ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999