STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mce2CPutative Mce family protein. (348 aa)    
Predicted Functional Partners:
mce2E
Putative Mce family protein.
 
  
 0.978
mce2A
Putative Mce family protein.
 
   
 0.975
yrbE2A
Putative YrbE family protein.
 
 
 0.966
yrbE2B
Putative YrbE family protein.
 
 
 0.964
mce2F
Putative Mce family protein.
 
     0.953
mce2B
Putative Mce family protein.
 
  
0.897
mce2D
Putative Mce family protein.
 
  
0.897
yrbE3B
Putative YrbE family protein.
 
 
 0.860
NFA_20200
Putative ABC transporter ATP-binding protein.
 
 
 0.843
NFA_51100
Putative ABC transporter ATP-binding protein.
 
 
 0.843
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.