STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_20180Hypothetical protein. (693 aa)    
Predicted Functional Partners:
NFA_55660
Hypothetical protein.
 
   
 0.776
NFA_55650
Hypothetical protein.
 
     0.775
NFA_55640
Hypothetical protein.
 
     0.771
NFA_46990
Hypothetical protein.
 
     0.768
NFA_55630
Hypothetical protein.
 
     0.600
NFA_50280
Putative stress protein.
 
  
0.572
NFA_55610
Hypothetical protein.
 
     0.512
NFA_20170
Putative peptidase.
       0.498
NFA_55690
Hypothetical protein.
 
   
 0.495
NFA_55620
Hypothetical protein.
 
     0.494
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.