Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NFA_21640Putative phenylacetic acid degradation protein. (167 aa)    
Predicted Functional Partners:
NFA_21620
Putative phenylacetic acid degradation protein.
 
 
 0.998
NFA_21630
Putative phenylacetic acid degradation protein.
 
 
 0.998
NFA_21610
Putative phenylacetic acid degradation protein.
 
 
 0.997
NFA_21650
Putative phenylacetic acid degradation NADH oxidoreductase.
 
 
 0.997
NFA_21660
Putative phenylacetate-CoA synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.993
NFA_21530
Putative thioesterase.
 
 
 0.988
echA11
Putative enoyl-CoA hydratase/isomerase family protein.
 
 
 0.978
NFA_21550
Putative dehydrogenase.
 
  
 0.936
NFA_41970
Putative enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.925
echA10
Putative enoyl-CoA hydratase/isomerase family protein.
  
  
 0.696
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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