STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_24100Putative glycosyltransferase. (288 aa)    
Predicted Functional Partners:
hldE
Hypothetical protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
   
 0.973
NFA_24120
Hypothetical protein.
 
     0.869
NFA_23990
Putative glycosyltransferase.
 
  
 0.814
NFA_1580
Hypothetical protein.
  
 
 0.764
NFA_32150
Putative histidine kinase.
  
 
 0.764
NFA_23960
Hypothetical protein.
 
   
 0.751
NFA_32610
Putative glycosyltransferase.
 
  
 0.732
NFA_23980
Putative glycosyltransferase.
 
   
 0.686
NFA_23950
Putative glycosyltransferase.
 
  
 0.684
NFA_27060
Putative glycosyltransferase.
 
   
 0.636
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.