Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NFA_33720Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (295 aa)    
Predicted Functional Partners:
NFA_33710
Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.840
NFA_33700
Putative monooxygenase.
 
   
 0.817
NFA_24180
Putative short chain dehydrogenase.
 
 
   0.787
NFA_33690
Putative oxidoreductase.
  
  
 0.774
NFA_33680
Hypothetical protein.
       0.762
NFA_54300
Putative short chain dehydrogenase.
 
 
   0.749
NFA_19660
Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.682
NFA_54820
Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.660
NFA_33730
Putative hydroxylase.
 
     0.643
NFA_25820
Putative short chain dehydrogenase.
 
   
 0.639
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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