Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFA_1530 | NFA_1580 | NFA_1530 | NFA_1580 | Putative two-component system sensor kinase. | Hypothetical protein. | 0.980 |
NFA_1530 | NFA_32150 | NFA_1530 | NFA_32150 | Putative two-component system sensor kinase. | Putative histidine kinase. | 0.980 |
NFA_1530 | NFA_45810 | NFA_1530 | NFA_45810 | Putative two-component system sensor kinase. | Putative two-component system sensor kinase. | 0.646 |
NFA_1580 | NFA_1530 | NFA_1580 | NFA_1530 | Hypothetical protein. | Putative two-component system sensor kinase. | 0.980 |
NFA_1580 | NFA_32150 | NFA_1580 | NFA_32150 | Hypothetical protein. | Putative histidine kinase. | 0.999 |
NFA_1580 | NFA_45810 | NFA_1580 | NFA_45810 | Hypothetical protein. | Putative two-component system sensor kinase. | 0.573 |
NFA_18700 | NFA_45810 | NFA_18700 | NFA_45810 | Putative two-component system response regulator. | Putative two-component system sensor kinase. | 0.913 |
NFA_18700 | whiB-4 | NFA_18700 | NFA_45800 | Putative two-component system response regulator. | Putative transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.403 |
NFA_32150 | NFA_1530 | NFA_32150 | NFA_1530 | Putative histidine kinase. | Putative two-component system sensor kinase. | 0.980 |
NFA_32150 | NFA_1580 | NFA_32150 | NFA_1580 | Putative histidine kinase. | Hypothetical protein. | 0.999 |
NFA_32150 | NFA_45810 | NFA_32150 | NFA_45810 | Putative histidine kinase. | Putative two-component system sensor kinase. | 0.573 |
NFA_41440 | NFA_45810 | NFA_41440 | NFA_45810 | Hypothetical protein. | Putative two-component system sensor kinase. | 0.549 |
NFA_41440 | whiB-4 | NFA_41440 | NFA_45800 | Hypothetical protein. | Putative transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.771 |
NFA_41440 | whiB-5 | NFA_41440 | NFA_46220 | Hypothetical protein. | Putative transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.767 |
NFA_45810 | NFA_1530 | NFA_45810 | NFA_1530 | Putative two-component system sensor kinase. | Putative two-component system sensor kinase. | 0.646 |
NFA_45810 | NFA_1580 | NFA_45810 | NFA_1580 | Putative two-component system sensor kinase. | Hypothetical protein. | 0.573 |
NFA_45810 | NFA_18700 | NFA_45810 | NFA_18700 | Putative two-component system sensor kinase. | Putative two-component system response regulator. | 0.913 |
NFA_45810 | NFA_32150 | NFA_45810 | NFA_32150 | Putative two-component system sensor kinase. | Putative histidine kinase. | 0.573 |
NFA_45810 | NFA_41440 | NFA_45810 | NFA_41440 | Putative two-component system sensor kinase. | Hypothetical protein. | 0.549 |
NFA_45810 | NFA_45820 | NFA_45810 | NFA_45820 | Putative two-component system sensor kinase. | Hypothetical protein. | 0.857 |
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