STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_460Hypothetical protein. (97 aa)    
Predicted Functional Partners:
NFA_480
Hypothetical protein.
       0.785
NFA_450
Hypothetical protein.
       0.780
NFA_430
Putative phage head.
       0.774
NFA_470
Hypothetical protein.
       0.773
NFA_440
Hypothetical protein.
       0.768
NFA_400
Hypothetical protein.
       0.694
NFA_410
Putative phage portal protein.
       0.694
NFA_420
Putative prohead protease.
       0.694
NFA_490
Hypothetical protein.
       0.672
NFA_380
Putative phage terminase small subunit.
       0.670
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.