STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_46680Putative serine/threonine protein kinase. (571 aa)    
Predicted Functional Partners:
NFA_840
Putative protein phosphatase.
 
 0.845
NFA_26960
Hypothetical protein.
 
 
 0.822
NFA_24860
Hypothetical protein.
 
 
 
 0.675
NFA_46690
Putative endonuclease IV.
     
 0.550
NFA_46670
Putative serine/threonine protein kinase.
 
    
0.549
NFA_46660
Putative serine/threonine protein kinase.
 
    
0.546
NFA_17330
Putative serine/threonine protein kinase.
 
 
0.451
NFA_850
Hypothetical protein.
 
 
 
 0.445
NFA_800
Putative serine/threonine protein kinase.
 
 
0.442
NFA_860
Hypothetical protein.
 
 
 
 0.441
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.