STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_47730Hypothetical protein. (130 aa)    
Predicted Functional Partners:
NFA_47720
Hypothetical protein.
 
     0.950
NFA_47710
Hypothetical protein.
 
     0.912
NFA_1580
Hypothetical protein.
 
 
 
 0.802
NFA_32150
Putative histidine kinase.
 
 
 
 0.800
NFA_47700
Hypothetical protein.
 
   
0.779
NFA_26740
Hypothetical protein.
  
     0.582
NFA_1530
Putative two-component system sensor kinase.
       0.487
NFA_7980
Hypothetical protein.
 
     0.485
NFA_28420
Putative two-component system sensor kinase.
   
 
 0.478
NFA_52850
Putative thioredoxin reductase.
   
 
 0.460
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.