Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFA_48060Putative short chain dehydrogenase. (248 aa)    
Predicted Functional Partners:
NFA_12570
Putative fatty acid synthase.
  
 0.656
NFA_12890
Putative short chain dehydrogenase.
 
 
 
 0.519
NFA_35820
Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.494
NFA_14380
Putative acyl-CoA synthetase.
  
 
 0.462
katB
Putative catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.452
NFA_12860
Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.449
NFA_4620
Hypothetical protein.
 
 0.448
NFA_52860
Putative two-component system sensor kinase.
  
 0.446
NFA_4520
Hypothetical protein.
 
 0.440
NFA_21550
Putative dehydrogenase.
  
 0.423
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.