Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFA_1010 | NFA_1580 | NFA_1010 | NFA_1580 | Hypothetical protein. | Hypothetical protein. | 0.759 |
NFA_1010 | NFA_32150 | NFA_1010 | NFA_32150 | Hypothetical protein. | Putative histidine kinase. | 0.806 |
NFA_1010 | NFA_49080 | NFA_1010 | NFA_49080 | Hypothetical protein. | Putative transcriptional regulator. | 0.481 |
NFA_1580 | NFA_1010 | NFA_1580 | NFA_1010 | Hypothetical protein. | Hypothetical protein. | 0.759 |
NFA_1580 | NFA_32150 | NFA_1580 | NFA_32150 | Hypothetical protein. | Putative histidine kinase. | 0.999 |
NFA_1580 | NFA_34400 | NFA_1580 | NFA_34400 | Hypothetical protein. | Hypothetical protein. | 0.580 |
NFA_1580 | NFA_49080 | NFA_1580 | NFA_49080 | Hypothetical protein. | Putative transcriptional regulator. | 0.442 |
NFA_1580 | dnaJ | NFA_1580 | NFA_54070 | Hypothetical protein. | Putative heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.580 |
NFA_1580 | dnaJ2 | NFA_1580 | NFA_14260 | Hypothetical protein. | Putative heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.580 |
NFA_32150 | NFA_1010 | NFA_32150 | NFA_1010 | Putative histidine kinase. | Hypothetical protein. | 0.806 |
NFA_32150 | NFA_1580 | NFA_32150 | NFA_1580 | Putative histidine kinase. | Hypothetical protein. | 0.999 |
NFA_32150 | NFA_34400 | NFA_32150 | NFA_34400 | Putative histidine kinase. | Hypothetical protein. | 0.580 |
NFA_32150 | NFA_49080 | NFA_32150 | NFA_49080 | Putative histidine kinase. | Putative transcriptional regulator. | 0.442 |
NFA_32150 | dnaJ | NFA_32150 | NFA_54070 | Putative histidine kinase. | Putative heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.580 |
NFA_32150 | dnaJ2 | NFA_32150 | NFA_14260 | Putative histidine kinase. | Putative heat shock protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.580 |
NFA_34400 | NFA_1580 | NFA_34400 | NFA_1580 | Hypothetical protein. | Hypothetical protein. | 0.580 |
NFA_34400 | NFA_32150 | NFA_34400 | NFA_32150 | Hypothetical protein. | Putative histidine kinase. | 0.580 |
NFA_34400 | NFA_49080 | NFA_34400 | NFA_49080 | Hypothetical protein. | Putative transcriptional regulator. | 0.474 |
NFA_38710 | NFA_49080 | NFA_38710 | NFA_49080 | Hypothetical protein. | Putative transcriptional regulator. | 0.452 |
NFA_49070 | NFA_49080 | NFA_49070 | NFA_49080 | Hypothetical protein. | Putative transcriptional regulator. | 0.620 |
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