Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NFA_51180Putative dehydratase; Belongs to the UPF0336 family. (356 aa)    
Predicted Functional Partners:
NFA_22490
Hypothetical protein.
  
 
 0.950
inhA
Putative enoyl-ACP reductase.
 
 
 0.946
fabG
Putative 3-oxoacyl-ACP reductase.
 
 0.944
katB
Putative catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.625
katC
Putative catalase.
   
 0.617
NFA_2710
Hypothetical protein.
  
   
 0.604
NFA_16140
Hypothetical protein.
 
     0.593
NFA_14380
Putative acyl-CoA synthetase.
  
 0.562
fadB
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.562
adk
Putative adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
  
 0.561
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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