STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_5200Hypothetical protein. (300 aa)    
Predicted Functional Partners:
NFA_5220
Hypothetical protein.
 
   
 0.938
NFA_5230
Hypothetical protein.
 
   
 0.935
NFA_5190
Hypothetical protein.
 
     0.925
NFA_5210
Putative lipid-transfer protein.
 
     0.896
NFA_4510
Hypothetical protein.
 
   
 0.658
NFA_5250
Putative acyl-CoA synthetase.
 
   
 0.649
NFA_4520
Hypothetical protein.
  
    0.648
NFA_5240
Putative oxidoreductase.
 
    
0.633
NFA_4470
Putative transcriptional regulator.
  
     0.608
NFA_23300
Putative dehydrogenase.
  
   
 0.579
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.