Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFA_11910 | NFA_31760 | NFA_11910 | NFA_31760 | Hypothetical protein. | Putative DNA-binding protein. | 0.430 |
NFA_11910 | NFA_53570 | NFA_11910 | NFA_53570 | Hypothetical protein. | Hypothetical protein. | 0.520 |
NFA_1410 | NFA_1580 | NFA_1410 | NFA_1580 | Hypothetical protein. | Hypothetical protein. | 0.998 |
NFA_1410 | NFA_32150 | NFA_1410 | NFA_32150 | Hypothetical protein. | Putative histidine kinase. | 0.998 |
NFA_1410 | NFA_53570 | NFA_1410 | NFA_53570 | Hypothetical protein. | Hypothetical protein. | 0.531 |
NFA_1580 | NFA_1410 | NFA_1580 | NFA_1410 | Hypothetical protein. | Hypothetical protein. | 0.998 |
NFA_1580 | NFA_32150 | NFA_1580 | NFA_32150 | Hypothetical protein. | Putative histidine kinase. | 0.999 |
NFA_1580 | NFA_53570 | NFA_1580 | NFA_53570 | Hypothetical protein. | Hypothetical protein. | 0.528 |
NFA_15920 | NFA_53570 | NFA_15920 | NFA_53570 | Hypothetical protein. | Hypothetical protein. | 0.597 |
NFA_31760 | NFA_11910 | NFA_31760 | NFA_11910 | Putative DNA-binding protein. | Hypothetical protein. | 0.430 |
NFA_31760 | NFA_53570 | NFA_31760 | NFA_53570 | Putative DNA-binding protein. | Hypothetical protein. | 0.697 |
NFA_32150 | NFA_1410 | NFA_32150 | NFA_1410 | Putative histidine kinase. | Hypothetical protein. | 0.998 |
NFA_32150 | NFA_1580 | NFA_32150 | NFA_1580 | Putative histidine kinase. | Hypothetical protein. | 0.999 |
NFA_32150 | NFA_53570 | NFA_32150 | NFA_53570 | Putative histidine kinase. | Hypothetical protein. | 0.528 |
NFA_32440 | NFA_53570 | NFA_32440 | NFA_53570 | Putative monooxygenase. | Hypothetical protein. | 0.513 |
NFA_53560 | NFA_53570 | NFA_53560 | NFA_53570 | Putative transcriptional regulator. | Hypothetical protein. | 0.894 |
NFA_53560 | NFA_53580 | NFA_53560 | NFA_53580 | Putative transcriptional regulator. | Hypothetical protein. | 0.684 |
NFA_53560 | fgd | NFA_53560 | NFA_53550 | Putative transcriptional regulator. | Putative F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. | 0.773 |
NFA_53570 | NFA_11910 | NFA_53570 | NFA_11910 | Hypothetical protein. | Hypothetical protein. | 0.520 |
NFA_53570 | NFA_1410 | NFA_53570 | NFA_1410 | Hypothetical protein. | Hypothetical protein. | 0.531 |
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