STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_56000Hypothetical protein. (95 aa)    
Predicted Functional Partners:
NFA_56010
Hypothetical protein.
 
   
 0.727
NFA_9850
Hypothetical protein.
  
     0.724
sdhC
Putative succinate dehydrogenase cytochrome b subunit.
  
   
 0.693
NFA_31280
Hypothetical protein.
  
     0.690
NFA_56610
Hypothetical protein.
  
     0.689
NFA_8910
Hypothetical protein.
  
     0.612
NFA_6340
Hypothetical protein.
  
     0.602
NFA_18340
Hypothetical protein.
  
     0.572
NFA_23190
Hypothetical protein.
  
     0.569
NFA_6520
Hypothetical protein.
  
     0.569
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.