STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_840Putative protein phosphatase. (509 aa)    
Predicted Functional Partners:
NFA_800
Putative serine/threonine protein kinase.
 
 0.997
NFA_810
Putative serine/threonine protein kinase.
 
 0.992
NFA_850
Hypothetical protein.
 
 
 0.974
NFA_17330
Putative serine/threonine protein kinase.
 
 0.972
NFA_820
Putative penicillin-binding protein.
  
  
 0.964
NFA_35780
Putative transketolase.
  
 0.962
ftsW2
Putative cell division protein; Belongs to the SEDS family.
 
  
 0.956
NFA_9040
Putative serine/threonine protein kinase.
 
 
 0.883
NFA_23650
Putative serine/threonine protein kinase.
 
 
 0.882
NFA_31920
Putative serine/threonine protein kinase.
 
 0.882
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.