Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OKH25883.1 | OKH25884.1 | NIES1031_12940 | NIES1031_12945 | N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |
OKH25883.1 | OKH26395.1 | NIES1031_12940 | NIES1031_11620 | N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-glutamate gamma-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.775 |
OKH25884.1 | OKH25883.1 | NIES1031_12945 | NIES1031_12940 | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |
OKH25884.1 | OKH25932.1 | NIES1031_12945 | NIES1031_12950 | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
OKH25884.1 | OKH26395.1 | NIES1031_12945 | NIES1031_11620 | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-glutamate gamma-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.760 |
OKH25884.1 | dnaG | NIES1031_12945 | NIES1031_12955 | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.421 |
OKH25884.1 | gshB | NIES1031_12945 | NIES1031_16860 | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family. | 0.712 |
OKH25932.1 | OKH25884.1 | NIES1031_12950 | NIES1031_12945 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
OKH25932.1 | dnaG | NIES1031_12950 | NIES1031_12955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.565 |
OKH26395.1 | OKH25883.1 | NIES1031_11620 | NIES1031_12940 | L-glutamate gamma-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
OKH26395.1 | OKH25884.1 | NIES1031_11620 | NIES1031_12945 | L-glutamate gamma-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.760 |
dnaG | OKH25884.1 | NIES1031_12955 | NIES1031_12945 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |
dnaG | OKH25932.1 | NIES1031_12955 | NIES1031_12950 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.565 |
gshB | OKH25884.1 | NIES1031_16860 | NIES1031_12945 | Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family. | Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |