STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH23605.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (754 aa)    
Predicted Functional Partners:
OKH27736.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.979
OKH23135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.978
OKH25436.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.972
OKH21527.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.972
OKH21526.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.955
OKH21528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.955
OKH25902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.879
OKH22448.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.870
OKH27404.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.850
OKH28550.1
Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.826
Your Current Organism:
Chroogloeocystis siderophila
NCBI taxonomy Id: 247279
Other names: C. siderophila 5.2 s.c.1, Chroogloeocystis siderophila 5.2 s.c.1, cyanobacterium 5.2 s.c.1, unidentified bacterium ATCC BAA-845
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.