Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAB60804.1 | GAB60863.1 | KSU1_A0037 | KSU1_B0006 | Asparagine synthase. | Glutamate synthase. | 0.552 |
GAB60804.1 | GAB61092.1 | KSU1_A0037 | KSU1_B0235 | Asparagine synthase. | Homoserine dehydrogenase. | 0.423 |
GAB60804.1 | GAB61704.1 | KSU1_A0037 | KSU1_C0108 | Asparagine synthase. | Glutamine synthase; Belongs to the glutamine synthetase family. | 0.544 |
GAB60804.1 | GAB62874.1 | KSU1_A0037 | KSU1_C1278 | Asparagine synthase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.503 |
GAB60804.1 | GAB63152.1 | KSU1_A0037 | KSU1_C1556 | Asparagine synthase. | Chorismate mutase. | 0.438 |
GAB60804.1 | carB | KSU1_A0037 | KSU1_B0128 | Asparagine synthase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.420 |
GAB60804.1 | gatA | KSU1_A0037 | KSU1_D0964 | Asparagine synthase. | aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.516 |
GAB60804.1 | gatB | KSU1_A0037 | KSU1_D0963 | Asparagine synthase. | aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.535 |
GAB60804.1 | gatC | KSU1_A0037 | KSU1_D0965 | Asparagine synthase. | aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.513 |
GAB60804.1 | nadE | KSU1_A0037 | KSU1_C0753 | Asparagine synthase. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.423 |
GAB60863.1 | GAB60804.1 | KSU1_B0006 | KSU1_A0037 | Glutamate synthase. | Asparagine synthase. | 0.552 |
GAB60863.1 | GAB61704.1 | KSU1_B0006 | KSU1_C0108 | Glutamate synthase. | Glutamine synthase; Belongs to the glutamine synthetase family. | 0.886 |
GAB60863.1 | carB | KSU1_B0006 | KSU1_B0128 | Glutamate synthase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.969 |
GAB60863.1 | gatA | KSU1_B0006 | KSU1_D0964 | Glutamate synthase. | aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.553 |
GAB60863.1 | gatB | KSU1_B0006 | KSU1_D0963 | Glutamate synthase. | aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.532 |
GAB60863.1 | gatC | KSU1_B0006 | KSU1_D0965 | Glutamate synthase. | aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.504 |
GAB60863.1 | nadE | KSU1_B0006 | KSU1_C0753 | Glutamate synthase. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.783 |
GAB61092.1 | GAB60804.1 | KSU1_B0235 | KSU1_A0037 | Homoserine dehydrogenase. | Asparagine synthase. | 0.423 |
GAB61092.1 | GAB62874.1 | KSU1_B0235 | KSU1_C1278 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.988 |
GAB61092.1 | GAB63152.1 | KSU1_B0235 | KSU1_C1556 | Homoserine dehydrogenase. | Chorismate mutase. | 0.614 |
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