STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB60810.1Conserved hypothetical protein. (84 aa)    
Predicted Functional Partners:
GAB60809.1
Conserved hypothetical protein.
       0.783
GAB62346.1
Hypothetical protein.
 
     0.758
GAB61430.1
Conserved hypothetical protein.
  
     0.721
GAB62375.1
Conserved hypothetical protein.
  
     0.721
GAB61431.1
Conserved hypothetical protein.
  
     0.688
GAB62374.1
Conserved hypothetical protein.
  
     0.688
GAB61821.1
Hypothetical protein.
 
     0.550
GAB63181.1
Conserved hypothetical protein.
  
     0.459
GAB60811.1
Hypothetical protein.
       0.426
GAB61257.1
DNA-methyltransferase.
  
     0.420
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.