STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB60838.1Hydrogenase expression/formation protein. (336 aa)    
Predicted Functional Partners:
GAB60837.1
Hydrogenase expression/formation protein.
 
 0.998
GAB60836.1
Hydrogenase assembly chaperone.
 
 
 0.997
GAB60835.1
Hydrogenase maturation protein.
 
 
 0.993
GAB62271.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
  
 0.510
GAB60845.1
Hydrogenase maturation protease.
 
   
 0.499
selA
Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.482
GAB60839.1
Hypothetical protein.
       0.479
GAB60840.1
4Fe-4S ferredoxin iron-sulfur binding protein.
     
 0.458
GAB60844.1
Nickel-dependent hydrogenase.
 
   
 0.456
GAB61641.1
NADH dehydrogenase subunit E.
   
 
 0.429
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.