STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB60991.12-oxoglutarate ferredoxin oxidoreductase alpha subunit. (569 aa)    
Predicted Functional Partners:
GAB60992.1
2-oxoglutarate ferredoxin oxidoreductase beta subunit.
 0.999
GAB62271.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 0.999
GAB64101.1
Pyruvate:ferredoxin and related 2-oxoacid:ferredoxin oxidoreductases beta subunit.
 
 0.999
GAB64142.1
2-oxoglutarate ferredoxin oxidoreductase beta subunit.
 0.999
GAB62156.1
Pyruvate ferredoxin oxidoreductase beta subunit.
  
 0.997
GAB64257.1
Pyruvate synthase beta subunit.
  
 0.997
GAB64259.1
Pyruvate synthase gamma/delta subunits.
  
 0.994
GAB62524.1
Putative ferredoxin.
  
 0.969
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
   0.955
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
   
   0.937
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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