STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61002.1Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (100 aa)    
Predicted Functional Partners:
GAB61000.1
Gas vesicle protein.
 
   
 0.925
GAB61003.1
Gas vesicle protein.
 
     0.888
GAB61006.1
Gas vesicle protein.
 
   
 0.860
GAB61008.1
Gas vesicle protein.
 
   
 0.817
GAB61004.1
Putative anion-transporting ATPase.
 
     0.800
GAB61015.1
Hypothetical protein.
 
   
 0.799
GAB61014.1
Hypothetical protein.
 
     0.780
GAB61001.1
Conserved hypothetical protein.
       0.732
GAB61018.1
Heat shock protein; Belongs to the small heat shock protein (HSP20) family.
 
     0.670
GAB61017.1
Cell division protein ATPase; Belongs to the AAA ATPase family.
 
     0.579
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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