STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61196.1Truncated deoxyribonuclease. (181 aa)    
Predicted Functional Partners:
GAB61197.1
Truncated deoxyribonuclease.
     0.990
GAB61198.1
Truncated deoxyribonuclease.
     0.985
GAB61199.1
Truncated deoxyribonuclease.
     0.984
GAB63482.1
Methyltransferase.
 
   0.911
GAB61195.1
Conserved hypothetical protein.
       0.773
GAB62954.1
Conserved hypothetical protein.
      0.722
GAB62940.1
Putative DNA methylase.
  
   0.663
GAB64324.1
DNA methylase.
  
   0.623
GAB62267.1
Type I restriction modification enzyme M subunit.
   
   0.615
GAB62741.1
Truncated DNA methyltransferase.
   
   0.615
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.