STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61323.1Conserved hypothetical protein. (329 aa)    
Predicted Functional Partners:
GAB61324.1
Putative methyltransferase.
     0.992
GAB61325.1
Putative glycosyltransferase.
 
     0.892
GAB61692.1
Conserved hypothetical protein.
  
     0.692
GAB63728.1
Fatty acid hydroxylase.
  
     0.624
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.586
GAB61694.1
Glycoside hydrolase.
  
     0.576
GAB61691.1
Conserved hypothetical protein.
 
   
 0.552
GAB61322.1
Putative thiol-disulfide oxidoreductase.
  
    0.549
GAB61321.1
Hypothetical protein.
       0.547
GAB61320.1
Thiol:disulfide interchange protein.
       0.440
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.