STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61377.1Putative transporter protein. (196 aa)    
Predicted Functional Partners:
GAB61378.1
ABC transporter substrate binding component.
       0.773
GAB61038.1
2-acyl-glycerophospho-ethanolamine acyltransferase.
    
 0.664
GAB63152.1
Chorismate mutase.
   
 
 0.662
GAB61920.1
Conserved hypothetical protein.
   
 
 0.590
GAB61380.1
ABC transporter ATP-binding component.
  
  
 0.521
GAB61379.1
ABC transporter permease component.
       0.517
GAB61376.1
Hypothetical protein.
       0.479
GAB61117.1
Nitrate reductase beta subunit NarH.
  
  
  0.468
GAB61092.1
Homoserine dehydrogenase.
   
  0.443
GAB60917.1
Nitrite transporter protein.
     
 0.441
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.