STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61451.1Conserved hypothetical protein. (527 aa)    
Predicted Functional Partners:
GAB61449.1
Putative phage baseplate lysozyme.
 
  
 0.911
GAB61448.1
Conserved hypothetical protein.
 
   
 0.904
GAB61454.1
Hypothetical phage protein.
 
  
 0.799
GAB61455.1
Putative phage tail sheath protein.
 
   
 0.799
GAB61851.1
Putative phage tail sheath protein.
 
   
 0.798
GAB61452.1
Conserved hypothetical protein.
 
    0.786
GAB61458.1
ATPase.
 
     0.780
GAB61856.1
ATPase.
 
     0.780
GAB61457.1
Conserved hypothetical protein.
 
     0.778
GAB61871.1
Conserved hypothetical protein.
 
     0.778
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.