STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61758.1Putative phosphoribosyltransferase. (244 aa)    
Predicted Functional Partners:
GAB63383.1
DNA internalization-related competence protein.
 
  
 0.910
GAB61281.1
DNA protecting protein DprA.
 
 
 0.871
GAB61738.1
Mg chelatase.
 
  
 0.812
GAB61759.1
Putative transporter protein.
       0.787
GAB61029.1
Conserved hypothetical protein; Belongs to the UPF0102 family.
 
    0.774
GAB64162.1
Diguanylate cyclase/phosphodiesterase.
  
  
 0.744
GAB61760.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
       0.732
GAB64140.1
Prephenate dehydrogenase.
   
  
 0.720
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.693
GAB64352.1
ABC transporter ATP-binding component.
   
    0.630
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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