STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61777.1Conserved hypothetical protein. (894 aa)    
Predicted Functional Partners:
GAB61611.1
Putative glycosyl transferase.
 
  
 0.923
GAB64077.1
Glycosyltransferase.
 
  
 0.921
GAB64290.1
Conserved hypothetical protein.
 
 
0.920
GAB63388.1
Putative glycosyltransferase.
  
 
 0.865
GAB64125.1
Conserved hypothetical protein.
 
  
 0.801
GAB61050.1
Conserved hypothetical protein.
 
     0.797
GAB62505.1
Conserved hypothetical protein.
 
     0.797
GAB62391.1
Putative heptosyltransferase.
  
 
 0.794
GAB61437.1
Conserved hypothetical protein.
 
     0.787
GAB61778.1
acetyl-CoA synthase.
       0.773
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.