Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAB61525.1 | GAB61548.1 | KSU1_B0668 | KSU1_B0691 | Putative RNA polymerase alpha subunit. | DNA helicase. | 0.995 |
GAB61525.1 | GAB61841.1 | KSU1_B0668 | KSU1_C0245 | Putative RNA polymerase alpha subunit. | Conserved hypothetical protein. | 0.932 |
GAB61525.1 | GAB62446.1 | KSU1_B0668 | KSU1_C0850 | Putative RNA polymerase alpha subunit. | Putative truncated helicase. | 0.994 |
GAB61525.1 | GAB62770.1 | KSU1_B0668 | KSU1_C1174 | Putative RNA polymerase alpha subunit. | Truncated DNA-directed RNA polymerase beta subunit. | 0.998 |
GAB61525.1 | GAB62771.1 | KSU1_B0668 | KSU1_C1175 | Putative RNA polymerase alpha subunit. | Truncated DNA-directed RNA polymerase beta subunit; Belongs to the RNA polymerase beta chain family. | 0.998 |
GAB61525.1 | GAB62772.1 | KSU1_B0668 | KSU1_C1176 | Putative RNA polymerase alpha subunit. | Truncated DNA-directed RNA polymerase beta subunit. | 0.998 |
GAB61525.1 | polA | KSU1_B0668 | KSU1_C0416 | Putative RNA polymerase alpha subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.481 |
GAB61525.1 | rpoA | KSU1_B0668 | KSU1_C1236 | Putative RNA polymerase alpha subunit. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.721 |
GAB61525.1 | rpoC | KSU1_B0668 | KSU1_C1202 | Putative RNA polymerase alpha subunit. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
GAB61548.1 | GAB61525.1 | KSU1_B0691 | KSU1_B0668 | DNA helicase. | Putative RNA polymerase alpha subunit. | 0.995 |
GAB61548.1 | GAB61841.1 | KSU1_B0691 | KSU1_C0245 | DNA helicase. | Conserved hypothetical protein. | 0.992 |
GAB61548.1 | GAB62446.1 | KSU1_B0691 | KSU1_C0850 | DNA helicase. | Putative truncated helicase. | 0.743 |
GAB61548.1 | GAB62770.1 | KSU1_B0691 | KSU1_C1174 | DNA helicase. | Truncated DNA-directed RNA polymerase beta subunit. | 0.935 |
GAB61548.1 | GAB62771.1 | KSU1_B0691 | KSU1_C1175 | DNA helicase. | Truncated DNA-directed RNA polymerase beta subunit; Belongs to the RNA polymerase beta chain family. | 0.935 |
GAB61548.1 | GAB62772.1 | KSU1_B0691 | KSU1_C1176 | DNA helicase. | Truncated DNA-directed RNA polymerase beta subunit. | 0.935 |
GAB61548.1 | polA | KSU1_B0691 | KSU1_C0416 | DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.996 |
GAB61548.1 | rpoA | KSU1_B0691 | KSU1_C1236 | DNA helicase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
GAB61548.1 | rpoC | KSU1_B0691 | KSU1_C1202 | DNA helicase. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.929 |
GAB61841.1 | GAB61525.1 | KSU1_C0245 | KSU1_B0668 | Conserved hypothetical protein. | Putative RNA polymerase alpha subunit. | 0.932 |
GAB61841.1 | GAB61548.1 | KSU1_C0245 | KSU1_B0691 | Conserved hypothetical protein. | DNA helicase. | 0.992 |
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