STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61894.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
GAB61895.1
Hypothetical protein.
       0.718
GAB61893.1
Formate/nitrite transporter protein.
  
    0.692
GAB61634.1
Conserved hypothetical protein; Belongs to the UPF0753 family.
  
    0.448
GAB63226.1
Carbonic anhydrase.
     
 0.442
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.432
GAB61426.1
Nitrite/formate transporter.
   
    0.418
GAB61427.1
Nitrite/formate transporter.
   
    0.418
GAB61677.1
Putative formate transporter.
   
    0.418
GAB63878.1
Formate/nitrite transporter.
   
    0.418
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.