Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAB61189.1 | GAB61525.1 | KSU1_B0332 | KSU1_B0668 | Diguanylate cyclase/phosphodiesterase. | Putative RNA polymerase alpha subunit. | 0.452 |
| GAB61189.1 | GAB61915.1 | KSU1_B0332 | KSU1_C0319 | Diguanylate cyclase/phosphodiesterase. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.793 |
| GAB61189.1 | GAB63321.1 | KSU1_B0332 | KSU1_D0012 | Diguanylate cyclase/phosphodiesterase. | Two-component sensor kinase. | 0.964 |
| GAB61189.1 | apt | KSU1_B0332 | KSU1_C0318 | Diguanylate cyclase/phosphodiesterase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.515 |
| GAB61525.1 | GAB61189.1 | KSU1_B0668 | KSU1_B0332 | Putative RNA polymerase alpha subunit. | Diguanylate cyclase/phosphodiesterase. | 0.452 |
| GAB61525.1 | GAB61915.1 | KSU1_B0668 | KSU1_C0319 | Putative RNA polymerase alpha subunit. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.743 |
| GAB61525.1 | GAB62771.1 | KSU1_B0668 | KSU1_C1175 | Putative RNA polymerase alpha subunit. | Truncated DNA-directed RNA polymerase beta subunit; Belongs to the RNA polymerase beta chain family. | 0.998 |
| GAB61525.1 | GAB62772.1 | KSU1_B0668 | KSU1_C1176 | Putative RNA polymerase alpha subunit. | Truncated DNA-directed RNA polymerase beta subunit. | 0.998 |
| GAB61525.1 | GAB63321.1 | KSU1_B0668 | KSU1_D0012 | Putative RNA polymerase alpha subunit. | Two-component sensor kinase. | 0.712 |
| GAB61525.1 | rpoA | KSU1_B0668 | KSU1_C1236 | Putative RNA polymerase alpha subunit. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.721 |
| GAB61525.1 | rpoB | KSU1_B0668 | KSU1_C1201 | Putative RNA polymerase alpha subunit. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| GAB61525.1 | rpoC | KSU1_B0668 | KSU1_C1202 | Putative RNA polymerase alpha subunit. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| GAB61915.1 | GAB61189.1 | KSU1_C0319 | KSU1_B0332 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Diguanylate cyclase/phosphodiesterase. | 0.793 |
| GAB61915.1 | GAB61525.1 | KSU1_C0319 | KSU1_B0668 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative RNA polymerase alpha subunit. | 0.743 |
| GAB61915.1 | GAB62771.1 | KSU1_C0319 | KSU1_C1175 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Truncated DNA-directed RNA polymerase beta subunit; Belongs to the RNA polymerase beta chain family. | 0.784 |
| GAB61915.1 | GAB62772.1 | KSU1_C0319 | KSU1_C1176 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Truncated DNA-directed RNA polymerase beta subunit. | 0.844 |
| GAB61915.1 | GAB63321.1 | KSU1_C0319 | KSU1_D0012 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component sensor kinase. | 0.717 |
| GAB61915.1 | apt | KSU1_C0319 | KSU1_C0318 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.840 |
| GAB61915.1 | dnaG | KSU1_C0319 | KSU1_B0010 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.860 |
| GAB61915.1 | rpoA | KSU1_C0319 | KSU1_C1236 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.834 |
page 1 of 3